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Description of Karyorelictea ( anglais )

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Postciliodesmatophoran ciliates, long, vermiform, flattened; many genera have one barren surface; extremely contractile, except Loxodida; two to many macronuclei contain approximately (sometimes slightly more than) the diploid amount of DNA; macronuclei form by division of micronuclei, then differentiate; the micronuclei divide, apparently by eumitosis.
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Karyorelictea ( anglais )

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Karyorelictea is a class of ciliates in the subphylum Postciliodesmatophora. Most species are members of the microbenthos community, that is, microscopic organisms found in the marine interstitial habitat, though one genus, Loxodes, is found in freshwater.

The majority of karyorelict taxa have not been cultivated in the laboratory, although clonal lines of Loxodes have been developed.

Systematics

According to Lynn (2008), the Karyorelictea class is divided into three orders:[2]

These three orders were defined morphologically, and have been confirmed with molecular phylogenetics.[3]

An additional family, Wilbertomorphidae, is of uncertain affiliation and has not been assigned to an order.[4]

Nuclear dimorphism

All ciliates, including karyorelicteans, possess two different kinds of nucleus, which separate the functions of gene expression and sexual recombination. The macronuclei, or somatic nuclei, are the site of transcription, while the smaller micronuclei, or germline nuclei, are only active during sexual reproduction, where they first undergo meiosis to form gametic nuclei, which are exchanged when two mating cells conjugate. Two gametic nuclei fuse to form a zygotic nucleus, which divides by mitosis into two daughter nuclei, one of which develops into a new micronucleus and the other into a macronucleus; the old macronucleus typically disintegrates (see main article).

In most ciliates, a macronucleus can divide during asexual reproduction to form new daughter macronuclei, through a process called amitosis. However, in karyorelicteans, the macronuclei are unable to divide. Instead, they must be produced by division and differentiation of a micronucleus every time, even during asexual reproduction.[5][6]

Because of their non-dividing somatic macronuclei, the karyorelicteans were thought to represent an intermediate evolutionary stage between the hypothetical ancestor of ciliates that did not have nuclear dualism, and the other more "advanced" ciliates which had both nuclear dualism and macronuclei that could divide by amitosis. The name of the group therefore makes reference to their supposedly "primitive" nuclei.[7] This theory has since been superseded, as molecular phylogenies have shown that the karyorelicteans are not the most "primitive" or basally-branching group of ciliates.[8]

Ecology

Almost all karyorelictean species, except Loxodes, have been described from the marine interstitial habitat, where they live in the pore-water spaces between sediment grains.[9] Animals from such habitats are known as meiofauna, and karyorelicteans have many morphological similarities to meiofaunal animals despite being protists: most karyorelicteans are relatively large (1 mm or more in length), have a worm-like (vermiform) body shape with an elongated tail, and exhibit thigmotactic behavior.[10] Most karyorelicteans feed on bacteria or algae, and prefer microaerobic conditions.[11][12][13] However, one genus, Kentrophoros, lacks an oral apparatus and feeds instead on symbiotic sulfur-oxidizing bacteria that are attached to one side of the cell.[14][15]

Etymology

The class name Karyorelictea derives from the ancient greek κάρυον (káruon), meaning "hard-shelled seed, or nucleus",[16][17] and from the Latin relictus, meaning 'abandoned'.[18]

Alternative genetic code

An alternative genetic code is used by the nuclear genome of some karyorelictid ciliates (e.g. Parduczia sp.).[19] This code corresponds to translation table 27 and involves the reassignment of three codons:

  • UAA into Gln (Q) ;
  • UAG into Gln (Q) ;
  • UGA into Trp (W) or Termination (*).

References

  1. ^ WoRMS (2009). "Karyorelictea". World Ciliophora Database. World Register of Marine Species. Retrieved July 21, 2010.
  2. ^ a b Lynn, Denis (2008). The Ciliated Protozoa: Characterization, Classification, and Guide to the Literature. Springer. ISBN 978-1-4020-8239-9.
  3. ^ Ilaria Andreoli; Lara Mangini; Filippo Ferrantini; Giovanni Santangelo; Franco Verni; Giulio Petroni (2009). "Molecular phylogeny of unculturable Karyorelictea (Alveolata, Ciliophora)". Zoologica Scripta. 38 (6): 651–662. doi:10.1111/j.1463-6409.2009.00395.x. S2CID 84951188.
  4. ^ Xu, Yuan; Li, Jiamei; Song, Weibo; Warren, Alan (September 2013). "Phylogeny and establishment of a new ciliate family, Wilbertomorphidae fam. nov. (Ciliophora, Karyorelictea), a highly specialized taxon represented by Wilbertomorpha colpoda gen. nov., spec. nov". The Journal of Eukaryotic Microbiology. 60 (5): 480–9. doi:10.1111/jeu.12055. PMID 23829190. S2CID 37210061.
  5. ^ Yan, Ying; Rogers, Anna J.; Gao, Feng; Katz, Laura A. (2017-05-22). "Unusual features of non-dividing somatic macronuclei in the ciliate class Karyorelictea". European Journal of Protistology. 61 (Pt B): 399–408. doi:10.1016/j.ejop.2017.05.002. PMC 5831164. PMID 28673471.
  6. ^ Raikov, I. B. (1985). "Primitive never-dividing macronuclei of some lower ciliates". Int. Rev. Cytol. International Review of Cytology. 95: 297–325. doi:10.1016/S0074-7696(08)60584-7. ISBN 9780123644954. PMID 2414246.
  7. ^ Corliss, J. O.; Hartwig, E. (1977). "The "primitive" interstitial ciliates: their ecology, nuclear uniquenesses, and postulated place in the evolution and systematics of the phylum Ciliophora". Mikrofauna Meeresbodens. 61: 65–88.
  8. ^ Gao, Feng; Warren, Alan; Zhang, Qianqian; Gong, Jun; Miao, Miao; Sun, Ping; Xu, Dapeng; Huang, Jie; Yi, Zhenzhen (2016-04-29). "The All-Data-Based Evolutionary Hypothesis of Ciliated Protists with a Revised Classification of the Phylum Ciliophora (Eukaryota, Alveolata)". Scientific Reports. 6 (1): 24874. Bibcode:2016NatSR...624874G. doi:10.1038/srep24874. PMC 4850378. PMID 27126745.
  9. ^ Foissner, Wilhelm (1998). "The karyorelictids (Protozoa: Ciliophora), a unique and enigmatic assemblage of marine, interstitial ciliates: a review emphasizing ciliary patterns and evolution". In Coombs, G.H.; Vickerman, K.; Sleigh, M.A.; Warren, A. (eds.). Evolutionary relationships among Protozoa. Springer. pp. 305–325. ISBN 978-0-412-79800-9.
  10. ^ Giere, Olav (2009). Meiobenthology : the microscopic motile fauna of aquatic sediments (2nd ed.). Springer. ISBN 978-3-540-68661-3. OCLC 310352202.
  11. ^ Fenchel, Tom (1969). "The ecology of marine microbenthos IV. Structure and function of the benthic ecosystem, its chemical and physical factors and the microfauna communities with special reference to the ciliated protozoa". Ophelia. 6: 1–182. doi:10.1080/00785326.1969.10409647.
  12. ^ Fenchel, Tom; Finlay, Bland (2008-11-01). "Oxygen and the Spatial Structure of Microbial Communities". Biological Reviews. 83 (4): 553–569. doi:10.1111/j.1469-185x.2008.00054.x. ISSN 1469-185X. PMID 18823390. S2CID 21908644.
  13. ^ Fauré-Fremiet, E (1950). "Écologie des ciliés psammophiles littoraux". Bull Biol Fr Belg. 84 (1): 35–75. PMID 15420543.
  14. ^ Finlay, Bland; Fenchel, Tom (1 July 1989). "Everlasting picnic for protozoa". New Scientist: 66–69.
  15. ^ Fenchel, Tom; Finlay, Bland (1989). "Kentrophoros: A mouthless ciliate with a symbiotic kitchen garden". Ophelia. 30: 75–93.
  16. ^ Bailly, Anatole (1981-01-01). Abrégé du dictionnaire grec français. Paris: Hachette. ISBN 978-2010035289. OCLC 461974285.
  17. ^ Bailly, Anatole. "Greek-french dictionary online". www.tabularium.be. Retrieved 2017-01-24.
  18. ^ Gaffiot, Félix (1934). Dictionnaire illustré Latin-Français (in French). Paris: Librairie Hachette. p. 1278. Retrieved 14 October 2017.
  19. ^ Swart, Estienne Carl; Serra, Valentina; Petroni, Giulio; Nowacki, Mariusz (28 July 2016). "Genetic Codes with No Dedicated Stop Codon: Context-Dependent Translation Termination". Cell. 166 (3): 691–702. doi:10.1016/j.cell.2016.06.020. PMC 4967479. PMID 27426948.
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Karyorelictea: Brief Summary ( anglais )

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Karyorelictea is a class of ciliates in the subphylum Postciliodesmatophora. Most species are members of the microbenthos community, that is, microscopic organisms found in the marine interstitial habitat, though one genus, Loxodes, is found in freshwater.

The majority of karyorelict taxa have not been cultivated in the laboratory, although clonal lines of Loxodes have been developed.

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Karyorelictea ( espagnol ; castillan )

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Karyorelictea es una clase de protistas del filo Ciliophora.[2][3]​ Tienen forma vermiforme, pues son largos y aplanados, extremadamente contráctiles, excepto en Loxodida. Los miembros de este grupo se caracterizan por no poder replicar el macronúcleo, un proceso denominado amitosis, por lo que este debe ser resintetizado a partir del micronúcleo en cada división celular.[4]​ La clase se divide en tres órdenes, definidos inicialmente morfológicamente, pero que han sido confirmados por análisis moleculares.

Referencias

  1. Classification of the Phylum Ciliophora, down to genus, revised by Denis Lynn (unpubl.), http://www.uoguelph.ca/~ciliates/classification/genera.html Archivado el 15 de julio de 2017 en Wayback Machine., Consultado el 27 de agosto de 2015
  2. Lynn, D. H. (2003). Morphology or molecules: how do we identify the major lineages of ciliates (Phylum Ciliophora). European Journal of Protistology, 39(4), 356-364.
  3. Lynn, Denis (2008). The Ciliated Protozoa: Characterization, Classification, and Guide to the Literature (3 ed.). Springer. p. 10.
  4. Ilaria Andreoli, Lara Mangini, Filippo Ferrantini, Giovanni Santangelo, Franco Verni & Giulio Petroni (2009). «Molecular phylogeny of unculturable Karyorelictea (Alveolata, Ciliophora)». Zoologica Scripta 38 (6): 651-662. doi:10.1111/j.1463-6409.2009.00395.x.

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Karyorelictea: Brief Summary ( espagnol ; castillan )

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Karyorelictea es una clase de protistas del filo Ciliophora.​​ Tienen forma vermiforme, pues son largos y aplanados, extremadamente contráctiles, excepto en Loxodida. Los miembros de este grupo se caracterizan por no poder replicar el macronúcleo, un proceso denominado amitosis, por lo que este debe ser resintetizado a partir del micronúcleo en cada división celular.​ La clase se divide en tres órdenes, definidos inicialmente morfológicamente, pero que han sido confirmados por análisis moleculares.

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Karyorelictea ( galicien )

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Os Karyorelictea son unha clase de protozoos ciliados caracterizados pola súa incapacidade de replicar o seu macronúcleo, un proceso chamado amitose que realizan outros ciliados. O macronúcleo debe ser resintetizado a partir do micronúcleo en cada división celular.[2] Todos os ciliados posúen varios núcleos dimórficos que teñen diferentes funcións, uns utilízanse para expresar as proteínas e denomínanse macronúcleos ou núcleos somáticos, e outros teñen a función de replicar o ADN herdable e denomínanse micronúcleos ou núcleos da liña xerminal. A maioría dos Karyorelictea non se poden cultivar, aínda que se desenvolveron liñas clonais de Loxodes. A clase está dividida en tres ordes, que son: Protostomatida, Loxodida e Protoheterotrichida, os cales foron inicialmente definidos polas súas características morfolóxicas, pero despois esta división foi confirmada pola filoxenética molecular.[2]

Notas

  1. WoRMS (2009). "Karyorelictea". World Ciliophora Database. World Register of Marine Species. Consultado o July 21, 2010.
  2. 2,0 2,1 Ilaria Andreoli, Lara Mangini, Filippo Ferrantini, Giovanni Santangelo, Franco Verni & Giulio Petroni (2009). "Molecular phylogeny of unculturable Karyorelictea (Alveolata, Ciliophora)". Zoologica Scripta 38 (6): 651–662. doi:10.1111/j.1463-6409.2009.00395.x.
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Karyorelictea: Brief Summary ( galicien )

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Os Karyorelictea son unha clase de protozoos ciliados caracterizados pola súa incapacidade de replicar o seu macronúcleo, un proceso chamado amitose que realizan outros ciliados. O macronúcleo debe ser resintetizado a partir do micronúcleo en cada división celular. Todos os ciliados posúen varios núcleos dimórficos que teñen diferentes funcións, uns utilízanse para expresar as proteínas e denomínanse macronúcleos ou núcleos somáticos, e outros teñen a función de replicar o ADN herdable e denomínanse micronúcleos ou núcleos da liña xerminal. A maioría dos Karyorelictea non se poden cultivar, aínda que se desenvolveron liñas clonais de Loxodes. A clase está dividida en tres ordes, que son: Protostomatida, Loxodida e Protoheterotrichida, os cales foron inicialmente definidos polas súas características morfolóxicas, pero despois esta división foi confirmada pola filoxenética molecular.

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Karyorelictea ( néerlandais ; flamand )

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Karyorelictea is een klasse van trilhaardiertjes. Karyorelictea is een van de twee klassen in de onderstam Postciliodesmatophora de andere is Heterotrichea. De klasse omvat drie ordes en twee geslachten waarvan de classificatie nog niet duidelijk is (Incertae sedis).[1]

Ordes

Incertae sedis


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Karyorelictea: Brief Summary ( néerlandais ; flamand )

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Karyorelictea is een klasse van trilhaardiertjes. Karyorelictea is een van de twee klassen in de onderstam Postciliodesmatophora de andere is Heterotrichea. De klasse omvat drie ordes en twee geslachten waarvan de classificatie nog niet duidelijk is (Incertae sedis).

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원시대핵류 ( coréen )

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원시대핵류(Karyorelictea)는 섬모충류의 일종이다.[2] 대부분의 종이 해양 모래 틈 서식지에 발견되는 소형 저서동물이지만 록소데스속(Loxodes) 종만은 민물에서 발견된다.

하위 분류

각주

  1. WoRMS (2009). “Karyorelictea”. 《World Ciliophora Database》. World Register of Marine Species. 2010년 7월 21일에 확인함.
  2. Lynn, Denis (2008년 6월 24일). 《The Ciliated Protozoa: Characterization, Classification, and Guide to the Literature》 (영어). Springer Science & Business Media. ISBN 9781402082399.
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