The following bibliography has been generated by bringing together all references provided by our content partners. There may be duplication.

References

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• Cadillo-Quiroz, H., Yavitt J. B., Zinder S. H., & Thies J. E. (2010). Diversity and Community Structure of Archaea Inhabiting the Rhizoplane of Two Contrasting Plants from an Acidic Bog. Microbial Ecology. 59(4), 757 - 767.
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• Ciccarelli, F. D., Doerks T., von Mering C., Creevey C. J., Snel B., & Bork P. (2006). Toward Automatic Reconstruction of a Highly Resolved Tree of Life. Science. 311(5765), 1283 - 1287.
• Coll M, Piroddi C, Steenbeek J, Kaschner K, Ben Rais Lasram F, et al. 2010. The Biodiversity of the Mediterranean Sea: Estimates, Patterns, and Threats. PLoS ONE 5(8): e11842. doi:10.1371/journal.pone.0011842
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• Danovaro, R., Company J B., Corinaldesi C., D'Onghia G., Galil B., Gambi C., et al. (2010). Deep-Sea Biodiversity in the Mediterranean Sea: The Known, the Unknown, and the Unknowable. PLoS ONE. 5(8), e11832.
• DeLong, E. F. (1992). Archaea in coastal marine environments. Proceedings of the National Academy of Sciences of the United States of America. 89, 5685-5689.
• Edgell, D. R., & Doolittle W. F. (1997). Archaea and the origin(s) of DNA replication proteins. Cell. 89, 995-998.
• Elkins, J. G., Podar M., Graham D. E., Makarova K. S., Wolf Y., Randau L., et al. (2008). A korarchaeal genome reveals insights into the evolution of the Archaea.. Proceedings of the National Academy of Sciences of the United States of America. 105(23), 8102-7.
• Fautin D, Dalton P, Incze LS, Leong J-AC, Pautzke C, et al. 2010. An Overview of Marine Biodiversity in United States Waters. PLoS ONE 5(8): e11914. doi:10.1371/journal.pone.0011914
• Fautin, D., Dalton P., Incze L. S., Leong J-A. C., Pautzke C., Rosenberg A., et al. (2010). An Overview of Marine Biodiversity in United States Waters. PLoS ONE. 5(8), e11914.
• Forterre, P. (2002). Evolution of the Archaea. Theoretical Population Biology. 61(4), 409 - 422.
• Francis, C. A., Roberts K. J., Beman J. M., Santoro A. E., & Oakley B. B. (2005). Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean. Proceedings of the National Academy of Sciences. 102(41), 14683 - 14688.
• Fujikura K, Lindsay D, Kitazato H, Nishida S, Shirayama. 2010. Marine Biodiversity in Japanese Waters. PLoS ONE 5(8): e11836. doi:10.1371/journal.pone.0011836
• Fujikura, K., Lindsay D., Kitazato H., Nishida S., & Shirayama Y. (2010). Marine Biodiversity in Japanese Waters. PLoS ONE. 5(8), e11836.
• Gordon DP, Beaumont J, MacDiarmid A, Robertson DA, Ahyong ST. 2010. Marine Biodiversity of Aotearoa New Zealand. PLoS ONE 5(8): e10905. doi:10.1371/journal.pone.0010905
• Gordon, D. P., Beaumont J., MacDiarmid A., Robertson D. A., & Ahyong S. T. (2010). Marine Biodiversity of Aotearoa New Zealand. PLoS ONE. 5(8), e10905.
• Gribaldo, S., & Brochier-Armanet C. (2006). The origin and evolution of Archaea: a state of the art. Philosophical Transactions of the Royal Society B: Biological Sciences. 361(1470), 1007 - 1022.
• Gribaldo, S., Poole A. M., Daubin V., Forterre P., & Brochier-Armanet C. (2010). The origin of eukaryotes and their relationship with the Archaea: are we at a phylogenomic impasse?. Nature Reviews Microbiology. 8, 743-752.
• Griffiths CL, Robinson TB, Lange L, Mead A, 2010. Marine Biodiversity in South Africa: An Evaluation of Current States of Knowledge. PLoS ONE 5(8): e12008. doi:10.1371/journal.pone.0012008
• Griffiths HJ. 2010. Antarctic Marine Biodiversity ? What Do We Know About the Distribution of Life in the Southern Ocean?. PLoS ONE 5(8): e11683. doi:10.1371/journal.pone.0011683
• Griffiths, C. L., Robinson T. B., Lange L., & Mead A. (2010). Marine Biodiversity in South Africa: An Evaluation of Current States of Knowledge. PLoS ONE. 5(8), e12008.
• Griffiths, H. J. (2010). Antarctic Marine Biodiversity – What Do We Know About the Distribution of Life in the Southern Ocean?. (Unsworth R., Ed.).PLoS ONE. 5(8), e11683.
• Gupta, R. (1998). Life's Third Domain (Archaea): An Established Fact or an Endangered Paradigm? A New Proposal for Classification of Organisms Based on Protein Sequences and Cell Structure. Theoretical Population Biology. 54(2), 91 - 104.
• HU, ANYI., YAO TANDONG., JIAO NIANZHI., LIU YONGQIN., YANG ZAO., & LIU XIAOBO. (2010). Community structures of ammonia-oxidising archaea and bacteria in high-altitude lakes on the Tibetan Plateau. Freshwater Biology. 55, 2375-2390.
• Hohn, M. J., Hedlund B. P., & Huber H. (2002). Detection of 16S rDNA sequences representing the novel phylum "Nanoarchaeota": indication for a wide distribution in high temperature biotopes.. Systematic and applied microbiology. 25(4), 551-4.
• Huber, H., Hohn M. J., Rachel R., Fuchs T., Wimmer V. C., & Stetter K. O. (2002). A new phylum of Archaea represented by a nanosized hyperthermophilic symbiont. Nature. 417(6884), 63 - 67.
• Kelly, S., Wickstead B., & Gull K. (2011). Archaeal phylogenomics provides evidence in support of a methanogenic origin of the Archaea and a thaumarchaeal origin for the eukaryotes. Proceedings of the Royal Society B: Biological Sciences. 278(1708), 1009 - 1018.
• Kimball, J. W. (2010). Archaea. Kimball's Biology Pages. 2011, The pages represent an online biology textbook..
• Leininger, S., Urich T., Schloter M., Schwark L., Qi J., Nicol G. W., et al. (2006). Archaea predominate among ammonia-oxidizing prokaryotes in soils. Nature. 442(7104), 806 - 809.
• Makarova, K. S., Yutin N., Bell S. D., & Koonin E. V. (2010). Evolution of diverse cell division and vesicle formation systems in Archaea. Nature Reviews Microbiology. 8(10), 731 - 741.
• Miloslavich P, Díaz JM, Klein E, Alvarado JJ, Díaz C, et al. 2010. Marine Biodiversity in the Caribbean: Regional Estimates and Distribution Patterns. PLoS ONE 5(8): e11916. doi:10.1371/journal.pone.0011916
• Miloslavich, P., Díaz J M., Klein E., Alvarado J J., Díaz C., Gobin J., et al. (2010). Marine Biodiversity in the Caribbean: Regional Estimates and Distribution Patterns. PLoS ONE. 5(8), e11916.
• Oxley, A. P. A., Lanfranconi M. P., Würdemann D., Ott S., Schreiber S., McGenity T. J., et al. (2010). Halophilic archaea in the human intestinal mucosa. Environmental Microbiology. 12(9), 2398 - 2410.
• Rachel, R., Meyer C., Klingl A., Gürster S., Heimerl T., Wasserburger N., et al. (2010). Methods in Cell Biology Electron Microscopy of Model Systems - Analysis of the Ultrastructure of Archaea by Electron Microscopy. 96, 47 - 69.
• Schleper, C. (2010). Ammonia oxidation: different niches for bacteria and archaea?. The ISME Journal. 4(9), 1092 - 1094.
• Soler, N., Marguet E., Cortez D., Desnoues N., Keller J., van Tilbeurgh H., et al. (2010). Two novel families of plasmids from hyperthermophilic archaea encoding new families of replication proteins. Nucleic Acids Research. 38(15), 5088 - 5104.
• Spang, A., Hatzenpichler R., Brochier-Armanet C., Rattei T., Tischler P., Spieck E., et al. (2010). Distinct gene set in two different lineages of ammonia-oxidizing archaea supports the phylum Thaumarchaeota. Trends in Microbiology. 18(8), 331 - 340.
• Tadeo X; López-Méndez B; Trigueros T; Laín A; Castaño D; Millet O. 2009. Structural basis for the aminoacid composition of proteins from halophilic archea. PLoS Biol. 7(12): e1000257.
• UCMP (Submitted). Introduction to the Archaea: Life's extremists. .. 2011, Berkeley, California: University of California Museum of Paleontology.
• Valentine, D. L. 2002. Biogeochemistry and microbial ecology of methane oxidation in anoxic environments: a review. Antonie van Leeuwenhoek. 81(1): 271-282.
• Woese, C. R., Kandler O., & Wheelis M. L. (1990). Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya. Proceedings of the National Academy of Sciences of the United States of America. 87,